Hepcidin
Hepcidin is a antibacterial and anti-fungal protein expressed in the liver and is also a signalling molecule in iron metabolism. The hepcidin protein is cysteine-rich and forms a distorted beta-sheet with an unusual disulphide bond found at the turn of the hairpin [PMID: 12138110]. |
The below sequences were used to create Hepcidin sequence signatures: |
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HepcidinH20_4, HepcidinH_22, HepcidinP20_4
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CAMPSQ4
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P81172
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10863973
ICIFCCGCCHRSKCGMCCKT
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HepcidinH21_2, HepcidinH_22, HepcidinP21_2
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CAMPSQ240
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P82951
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21542075
GCRFCCNCCPNMSGCGVCCRF
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HepcidinH25_6, HepcidinH_22, HepcidinP25_6
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CAMPSQ983
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P81172
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159162673
DTHFPICIFCCGCCHRSKCGMCCKT
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HepcidinH21_2, HepcidinH_22, HepcidinP21_2
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CAMPSQ1098
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A1Z0M0
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223635234
RCRFCCRCCPRMRGCGICCRF
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HepcidinH25_6, HepcidinH_22, HepcidinP25_6
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CAMPSQ1533
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Q9EQ21
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21542093
DTNFPICIFCCKCCNNSQCGICCKT
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HepcidinH20_4, HepcidinH_22, HepcidinP20_4
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CAMPSQ2895
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CRFCCRCCPRMRGCGLCCRF
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HepcidinH_22
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CAMPSQ2896
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GIKCRFCCGCCTPGICGVCCRF
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HepcidinH20_4, HepcidinH_22, HepcidinP20_4
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CAMPSQ2897
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QSHLSLCRWCCNCCRSNKGC
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HepcidinH24_2, HepcidinH_22, HepcidinP24_2
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CAMPSQ3425
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SPAGCRFCCGCCPNMRGCGVCCRF
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HepcidinH_22
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CAMPSQ3428
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D3Y2R5
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289431952
MKTFSVAVAVAIVLAFICTQESSALPVTGVEELVELVSSDDPVADHQELPVELGERLFNI RKKRASPKCTPYCYPTRDGVFCGVRCDF
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HepcidinH_22
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CAMPSQ3429
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D3Y2R6
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289431954
MKTFSVAVAVAVVLAFICTQESSALPVTGIEELVEPVSSDNNDNHQGLPVELRERLVNIR KKRAPTDCIPYCYPTGDGFHCGVTCRF
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HepcidinH31_2, HepcidinH_22, HepcidinP31_2
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CAMPSQ3812
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APAKCTPYCYPTRDGVFCGVRCDFQHHHHHH
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HepcidinH_22
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CAMPSQ4289
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E8ZAD0
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282167192
MKVLAACVFLLLLVLLHGSPAACSALRAQANIGLMPRPETGAQSHGLEAAAGLMPHPEIG AQSLEVPLRRSKRFNSHFPICSYCCNCCRNKGCGLCCRT
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HepcidinH25_6, HepcidinH_22, HepcidinP25_6
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CAMPSQ8887
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QSHLSLCRWCCNCCHNKGCGFCCKF
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HepcidinH_22
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CAMPSQ10878
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QSHLSMCRYCCNCCRNNKGCGFCCKF
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HepcidinH24_2, HepcidinH_22, HepcidinP24_2
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CAMPSQ10879
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NPAGCRFCCGCCPNMIGCGVCCRF
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HepcidinH_22
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CAMPSQ11272
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MRTYLKTMLLAGLASLLLVAQAERALTSMDALDAAIEFYNRASEHDHAFKQASLFNLQET VCLKSENYEKPKCTFMENGLLLKCSALVSVLKESSAFANIAVTCDTSIPNKQEVARVKRG GNGSRGREGGRPGSRSSTGKPSKSLNFVERLL
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HepcidinH25_6, HepcidinH_22, HepcidinP25_6
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CAMPSQ11275
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QSHFPICLYCCNCCKNKGCGYCCRT
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HepcidinH25_6, HepcidinH_22, HepcidinP25_6
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CAMPSQ11456
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QSHLSLCRYCCNCCRNKGCGYCCKF
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HepcidinH25_6, HepcidinH_22, HepcidinP25_6
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CAMPSQ12607
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Q8MJ80
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47605566
DTHFPICIFCCGCCRKAICGMCCKT
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HepcidinH31_2, HepcidinH_22, HepcidinP31_2
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CAMPSQ14223
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SPAGRNSRRRRCRFCCGCCPDMVGCGTCCKF
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HepcidinH20_4, HepcidinH_22, HepcidinP20_4
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CAMPSQ14224
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CRFCCGCCPDMVGCGTCCKF
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The below sequences were retrieved using Hepcidin sequence signatures: |
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6, HepcidinP20_4, HepcidinP25_6
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CAMPSQ4
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P81172
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10863973
ICIFCCGCCHRSKCGMCCKT
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HepcidinH_22, HepcidinH20_4, HepcidinH21_2, HepcidinH24_2, HepcidinH31_2, HepcidinP20_4, HepcidinP21_2
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CAMPSQ240
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P82951
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21542075
GCRFCCNCCPNMSGCGVCCRF
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6, HepcidinP20_4, HepcidinP25_6
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CAMPSQ983
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P81172
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159162673
DTHFPICIFCCGCCHRSKCGMCCKT
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HepcidinH_22, HepcidinH20_4, HepcidinH21_2, HepcidinH24_2, HepcidinH31_2, HepcidinP20_4, HepcidinP21_2
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CAMPSQ1098
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A1Z0M0
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223635234
RCRFCCRCCPRMRGCGICCRF
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6, HepcidinP20_4, HepcidinP25_6
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CAMPSQ1464
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Q5U9D2
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58761191
PHQTGQLTDLRAQDTAGAEAGLQPTLQLRRLRRRDTHFPICIFCCGCCKTPKCGFCCKT
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6, HepcidinP20_4, HepcidinP25_6
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CAMPSQ1533
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Q9EQ21
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21542093
DTNFPICIFCCKCCNNSQCGICCKT
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6, HepcidinP20_4, HepcidinP25_6
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CAMPSQ1682
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Q7T273
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45387595
LCRFCCKCCRNKGCGYCCKF
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6, HepcidinP20_4, HepcidinP25_6
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CAMPSQ1684
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Q5U9D2
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62900176
PHQTGQLTDLRAQDTAGAEAGLQPTLQLRRLRRRDTHFPICIFCCGCCKTPKCGLCCKT
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6, HepcidinP20_4, HepcidinP25_6
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CAMPSQ1685
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Q7T273, P61516
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143811401, 47605599
QSHLSLCRFCCKCCRNKGCGYCCKF
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HepcidinH_22, HepcidinH25_6, HepcidinP20_4
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CAMPSQ1686
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Q99MH3
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21542070
DTNFPICLFCCKCCKNSSCGLCCIT
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6
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CAMPSQ1687
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Q9DFD6
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21542090
XSHLSLCRWCCNCCHNKGXGFCCKF
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HepcidinH_22, HepcidinH25_6
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CAMPSQ1813
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Q801Y3
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47605662
QIHLSLCGLCCNCCHNIGCGFCCKF
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6
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CAMPSQ1899
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Q5NVR8
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75040808
DTHFPIYIFCCGCCHRSKCGMCCKT
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HepcidinH_22, HepcidinH25_6, HepcidinP20_4
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CAMPSQ1901
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Q80T19
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47605663
DINFPICRFCCQCCNKPSCGICCEE
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6, HepcidinP20_4, HepcidinP25_6
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CAMPSQ12607
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Q8MJ80
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47605566
DTHFPICIFCCGCCRKAICGMCCKT
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HepcidinH_22, HepcidinH20_4, HepcidinH25_6, HepcidinP20_4, HepcidinP25_6
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CAMPSQ15989
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P61516
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MKLSNVFLAAVVILTCVCVFQITAVPFIQQVQDEHHVESEELQENQHLTEAEHRQTDPLV LFRTKRQSHLSLCRFCCKCCRNKGCGYCCKF
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© 2022, Biomedical Informatics Centre, NIRRCH, Mumbai |
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