ScanProsite

ScanProsite

This form allows you to scan proteins for matches against the PROSITE collection of motifs as well as against your own patterns.

Link to the Original tool server..

Option 1 - Submit PROTEIN sequences to scan them against the PROSITE collection of motifs.
Option 2 - Submit MOTIFS to scan them against a PROTEIN sequence database.
Option 3 - Submit PROTEIN sequences and MOTIFS to scan them against each other.



STEP 1 - Submit PROTEIN sequences [help]

Submit PROTEIN sequences (max. 10) Examples
Submit a PROTEIN database (max. 16MB) for repeated scans (The data will be stored on our server for 1 month).


Supported input:

STEP 2 - Select options [help]

Exclude motifs with a high probability of occurrence from the scan
Exclude profiles from the scan
Run the scan at high sensitivity (show weak matches for profiles)

STEP 3 - Select output options and submit your job

Output format:
Retrieve complete sequences: If you choose this option, not all output formats are available.
Receive your results by email

Tool By :SIB Swiss Institute of Bioinformatics | Disclaimer

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