Pseudin

Description
Pseudins are a subfamily of the FSAP family (Frog Secreted Active Peptides) extracted from the skin of the paradoxical frog Pseudis paradoxa. The pseudins belong to the class of cationic, amphipathic-helical antimicrobial peptides [PMID: 11689009].
Pfam
Interpro
Patterns
PseudinP23_3
 G-[IL]-N-T-L-K-K-V-I-Q-G-L-H-E-V-I-K-L-V-[NS]-N-H-[AE]
PseudinP24_6
 G-L-N-[AT]-L-K-K-V-F-Q-[GP]-[IL]-H-[EK]-A-I-K-x-I-N-N-H-V-Q
PseudinP_9
 G-[IL]-N-[AT]-L-K-K-V-[FI]-Q-[GP]-[IL]-H-[EK]-[AV]-I-K-x-[IV]-[NS]-N-H
HMMs
PseudinH23_3
PseudinH24_6
PseudinH_9

Note:
The format for Signature ID is the family name, followed by H or P for HMM or Pattern respectively. The integer suffixed to H or P denotes the length of the sequences used to create the family signature. If no integer is suffixed, it indicates that the signature was created using all the sequences of the family. The integer following the underscore denotes the number of sequences used for the creation of signatures.

For example:
AureinH_21 is a HMM for Aurein family created using 21 sequences.
AureinP16_9 is a pattern for Aurein family derived using 9 input sequences that are 16 residues long.

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