Phylloseptin

Description
This family consists of antimicrobial peptides that are a group of structurally related peptides identified in the skin secretions of the Brazilian tree frog Phyllomedusa hypochondrialis and P. oreades [PMID: 15752569].
Patterns
PhylloseptinP18_3
L-[GS]-[LM]-I-P-x-[AI]-[IV]-[ST]-[AG]-[IV]-[AS]-[AS]-[IL]-[AS]-K
PhylloseptinP19_11
F-[FL]-S-[LM]-[IL]-P-x-[AI]-[AIV]-[GNST]-[AG]-[AIV]-[ASV]-[AS]-[IL]-[AV]-K
PhylloseptinP20_5
F-[FL]-S-[LM]-[IL]-P-x-[AI]-[AIV]-[GNS]-[AG]-[AIV]-[ASV]-[AST]-[IL]-[AV]-[HK]-x(2)-G
HMMs
PhylloseptinH18_3
PhylloseptinH19_11
PhylloseptinH20_5
PhylloseptinH_19

Note:
The format for Signature ID is the family name, followed by H or P for HMM or Pattern respectively. The integer suffixed to H or P denotes the length of the sequences used to create the family signature. If no integer is suffixed, it indicates that the signature was created using all the sequences of the family. The integer following the underscore denotes the number of sequences used for the creation of signatures.

For example:
AureinH_21 is a HMM for Aurein family created using 21 sequences.
AureinP16_9 is a pattern for Aurein family derived using 9 input sequences that are 16 residues long.

| © 2022, Biomedical Informatics Centre, ICMR-NIRRCH |
ICMR-National Institute for Research in Reproductive and Child Health, Jehangir Merwanji Street, Parel, Mumbai-400012
Maharashtra, India