Coleoptericin
Description |
This family consists of several insect coleoptericin, acaloleptin, holotricin and rhinocerosin proteins which are all known to be antibacterial proteins. These all appear to be short, glycine-rich molecules, inducible by infection [PMID: 11520352]. |
| Pfam |
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| Interpro |
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| Patterns |
ColeoptericinP_6 |
N-T-x-[AGT]-[DQST]-I-[DEN]-[AIV]-x(3)-[GT]-x-[DNR]-x-[DE]-[FV]-x-[AG]-[GNT]-W-[DGNST]-K-V-[IV]-[DR]-G-P-[GN]-[KR]-[AS]-K-P-[NT]-[FWY]-x-[IV]-x-G-[ST]-[HWY]-R |
| HMMs |
| ColeoptericinH_6 |
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Note:
The format for Signature ID is the family name, followed by H or P for HMM or Pattern respectively. The integer suffixed to H or P denotes the length of the sequences used to create the family signature. If no integer is suffixed, it indicates that the signature was created using all the sequences of the family. The integer following the underscore denotes the number of sequences used for the creation of signatures.
For example:
AureinH_21 is a HMM for Aurein family created using 21 sequences.
AureinP16_9 is a pattern for Aurein family derived using 9 input sequences that are 16 residues long. |
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| © 2022, Biomedical Informatics Centre, ICMR-NIRRCH |
ICMR-National Institute for Research in Reproductive and Child Health, Jehangir Merwanji Street, Parel, Mumbai-400012
Maharashtra, India |
